Publications

Preprints

DNA methylation memory of pancreatic acinar-ductal metaplasia transition state altering Kras-downstream PI3K and Rho GTPase signaling in the absence of Kras mutation
Lo EKW, Idrizi A, Tryggvadottir R, Zhou W, Wenpin Hou, Ji H, Cahan P#, Feinberg AP#
bioRxiv 2024 Oct 29.
10.1101/2024.10.26.620414
The Hippo-YAP/TAZ-TEAD axis promotes multipotency in bone marrow stromal cells
Cheng YH, Chan CHR , Bian Q, Merling RK, Kuznetsov SA, Robey PG, Cahan P
bioRxiv 2024 May 17.
PMID: 38798468
A systematic comparison of computational methods for expression forecasting
Kernfeld EM, Yang Y, Weinstock JS, Battle A#, Cahan P#
bioRxiv 2023 Jul 31:2023.07.28.551039.
PMID: 37577640

Peer reviewed

OneSC: A computational platform for recapitulating cell state transitions
Peng D and Cahan P
Bioinformatics Nov 21, 2024:btae703.
PMID: 39570626
74
Cell cycle expression heterogeneity predicts degree of differentiatio
Noller K and Cahan P
Briefings in Bioinformatics 2024 Sep 23;25(6):bbae536.
PMID: 39446193
73
Transcriptome data are insufficient to control false discoveries in regulatory network inference
Kernfeld EM, Keener RM, Cahan P#, Battle A#
Cell Systems 2024 Aug 21;15(8):709-724.e13
PMID: 39173585
72
Direct comparison of mass cytometry and single-cell RNA sequencing of human peripheral blood mononuclear cells
Su EY*, Fread K*, Goggin S, Zunder ER#, Cahan P#
Scientific Data 2024 May 30;11(1):559.
PMID: 38816402
71
Organogenetic transcriptomes of the Drosophila embryo at single cell resolution
Peng D, Jackson D, Palicha B, Kernfeld EM, Laughner N, Shoemaker A, Celniker SE, Loganathan R, Cahan P#, Andrew DJ#
Development 2024 Jan 15;151(2)
PMID: 38174902
70
Analysis of the human kidney transcriptome and plasma proteome identifies markers of proximal tubule maladaptation to injury.
Wen Y, Su E, Xu L, Menez S, Moledina DG, Obeid W, Palevsky PM, Mansour SG, Devarajan P, Cantley LG, Cahan P, Parikh CR; Kidney Precision Medicine Project; Translational Investigation of Biomarker Endpoint of Acute Kidney Injury.
Science Translational Medicine 2023 Dec 13;15(726):eade7287.
PMID: 38091407
69
Single cell and spatial transcriptomics analysis of kidney double negative T lymphocytes in normal and ischemic mouse kidneys.
Gharaie S, Lee K, Noller K, Lo EK, Miller B, Jung HJ, Newman-Rivera AM, Kurzhagen JT, Singla N, Welling PA, Fan J, Cahan P, Noel S, Rabb H.
Scientific Reports 2023 Nov 28;13(1):20888.
PMID: 38017015
68
Platform-agnostic CellNet enables cross-study analysis of cell fate engineering protocols.
Lo EKW, Velazquez J, Peng D, Kwon C, Ebrahimkhani MR, Cahan P
Stem Cell Reports 2023 Aug 8;18(8):1721-1742
PMID: 37478860
67
RANK+TLR2+ myeloid subpopulation converts autoimmune to joint destruction in rheumatoid arthritis.
Zhang W#, Noller K#, Crane J, Wan M, Wu X, Cahan P, Cao X.
Elife. 2023 May 19;12:e85553.
PMID: 37204303
66
Sympathetic Innervation Regulates Osteocyte-Mediated Cortical Bone Resorption during Lactation.
Guo Q, Chen N, Qian C, Qi C, Noller K, Wan M, Liu X, Zhang W, Cahan P, Cao X.
Advanced Science 2023 Apr 26:e2207602
PMID: 37186379
65
Gene regulation network inference using k-nearest neighbor-based mutual information estimation: revisiting an old DREAM.
Shachaf LI, Roberts E, Cahan P, Xiao J.
BMC Bioinformatics. 2023 Mar 6;24(1):84.
PMID: 36879188
64
Immune Checkpoint Molecule TIGIT Regulates Kidney T Cell Functions and Contributes to AKI.
Noel S, Lee K, Gharaie S, Kurzhagen JT, Pierorazio PM, Arend LJ, Kuchroo VK, Cahan P, Rabb H.
J Am Soc Nephrol. 2023 Jan 13.
PMID: 36747315
63
A conversation with ChatGPT on the role of computational systems biology in stem cell research
Cahan P#, Treutlein B#
Stem Cell Reports. 2023 Jan 10;18(1):1-2
PMID: 36630899
62
Single-Cell Transcriptomic Census of Endothelial Changes Induced by Matrix Stiffness and the Association with Atherosclerosis.
Zamani M*, Cheng YH*,Charbonier F, Kumar V, Mayer AT, Trevino AE, Quertermous T, Chaudhuri O, Cahan P#, Huang NF#
Advanced Functional Materials. 2022 Nov 17;32(47):2203069
PMID: 36816792
61
Engineering Skeletal Muscle Grafts with PAX7::GFP-Sorted Human Pluripotent Stem Cell-Derived Myogenic Progenitors on Fibrin Microfiber Bundles for Tissue Regeneration
Somers SM, Gilbert-Honick J, Choi IY, Lo EKW, Lim H, Dias S, Wagner KR, Mao HQ, Cahan P, Lee G, Grayson WL
Bioengineering (Basel). 2022 Nov 15;9(11):693.
PMID: 36421094
60
Reconstruction of dynamic regulatory networks reveals signaling-induced topology changes associated with germ layer specification.
Su EY*, Spangler A*,Bian Q, Kasamoto JY, Cahan P
Stem Cell Reports. 2022 Jan 10
PMID: 35090587
59
Spatial transcriptomics reveals a role for sensory nerves in preserving cranial suture patency through modulation of BMP/TGF-β signaling.
Tower RJ, Li Z, Cheng YH, Wang XW, Rajbhandari L, Zhang Q, Negri S, Uytingco CR, Venkatesan A, Zhou FQ, Cahan P, James AW, Clemens TL.
Proc Natl Acad Sci U S A. 2021 Oct 19;118(42)
PMID: 34663698
58
Computational reconstruction of the signalling networks surrounding implanted biomaterials from single-cell transcriptomics.
Cherry C, Maestas DR, Han J, Andorko JI, Cahan P, Fertig EJ, Garmire LX, Elisseeff JH.
Nature Biomedical Engineering 2021 Aug 2.
PMID: 34341534
57
Evaluating the transcriptional fidelity of cancer models.
Peng D*, Gleyzer R*, Tai WH, Kumar P, Bian Q, Isaacs B, Rocha EL, Cai S, DiNapoli K, Huang FW, Cahan P
Genome Medicine 2021 Apr 13;73.
PMID: 33926541
56
Challenges for Computational Stem Cell Biology: A Discussion for the Field.
Rackham O, Cahan P, Mah N, Morris S, Ouyang JF, Plant AL, Tanaka Y, Wells CA.
Stem Cell Reports 2021 Jan 12;16(1):3-9.
PMID: 33440181
55
Computational Stem Cell Biology: Open Questions and Guiding Principles.
Cahan P, Cacchiarelli D, Dunn SJ, Hemberg M, de Sousa Lopes SMC, Morris SA, Rackham OJL, Del Sol A, Wells CA.
Cell Stem Cell 2021 Jan 7;28(1):20-32.
PMID: 33417869
54
Gene Regulatory Network Analysis and Engineered Directs Development and Vascularization of Multilineage Human Liver Organoids.
Velazquez JJ, LeGraw R, Moghadam F, Tan Y, Kilbourne J, Maggiore JC, Hislop J, Liu S, Cats D, Chuva de Sousa Lopes SM, Plaisier C, Cahan P, Kiani S, Ebrahimkhani MR
Cell Systems 2020 Nov 30:S2405-4712(20)30420-8.
PMID: 33290741
53
Hepatocyte-like cells derived from human induced pluripotent stem cells using small molecules: implications of a transcriptomic study.
Gao X, Li R, Cahan P, Zhao Y, Yourick JJ, Sprando RL
Stem Cell Res Ther. 2020 Sep 11;11(1):393.
PMID: 32917265
52
A single cell transcriptional atlas of early synovial joint development.
Bian Q, Cheng YH, Wilson JP, Su EY, Kim DQ, Yoo S, Blackshaw S, Cahan P
Development. 2020 June 20;147(14):dev185777
PMID: 32580935
51
Evaluation of Bunina et al.: Synthesizing Multi-omics Data to Delineate Neuronal Differentiation.
Lo EKW, Su EY, Cahan P
Cell Systems. 2020 Jun 24;10(6):459-460.
PMID: 32585153
50
Small-Molecule PAPD5 Inhibitors Restore Telomerase Activity in Patient Stem Cells.
Nagpal N, Wang J, Zeng J, Lo E, Moon DH, Luk K, Braun RO, Burroughs LM, Keel SB, Reilly C, Lindsley RC, Wolfe SA, Tai AK, Cahan P, Bauer DE, Fong YW, Agarwal S.
Cell Stem Cell. 2020 Apr 17:S1934-5909(20)30138-7
PMID: 32320679
49
Transcriptome Dynamics of Hematopoietic Stem Cell Formation Revealed Using a Combinatorial Runx1 and Ly6a Reporter System.
Chen MJ, Lummertz da Rocha E, Cahan P, Kubaczka C, Hunter P, Sousa P, Mullin NK, Fujiwara Y, Nguyen M, Tan Y, Landry S, Han A, Yang S, Lu YF, Jha DK, Vo LT, Zhou Y, North TE, Zon LI, Daley GQ, Schlaeger TM.
Stem Cell Reports.2020 Apr 9S2213-6711(20)30110-7.
PMID: 32302558
48
Multi-scale cellular engineering: From molecules to organ-on-a-chip.
Huang NF, Chaudhuri O, Cahan P, Wang A, Engler AJ, Wang Y, Kumar S, Khademhosseini A, Li S.
APL Bioengineering.2020 Mar 3;4(1).
PMID: 32161833
47
Interleukin-36γ-producing macrophages drive IL-17-mediated fibrosis.
Sommerfeld SD, Cherry C, Schwab RM, Chung L, Maestas DR Jr, Laffont P, Stein JE, Tam A, Ganguly S, Housseau F, Taube JM, Pardoll DM, Cahan P, Elisseeff JH.
Science Immunology. 2019 Oct 11;4(40).
PMID: 31604843
46
SingleCellNet: A Computational Tool to Classify Single Cell RNA-Seq Data Across Platforms and Across Species.
Tan Y and Cahan P
Cell Systems. 2019 Jul 17. pii: S2405-4712(19)30199-1.
PMID: 31377170
45
A systems biology pipeline identifies regulatory networks for stem cell engineering.
Kinney MA, Vo LT, Frame JM, Barragan J, Conway AJ, Li S, Wong KK, Collins JJ, Cahan P, North TE, Lauffenburger DA, Daley GQ
Nature Biotechnology. 2019 Jul;37(7):810-818
PMID: 31267104
44
A Public BCR Present in a Unique Dual-Receptor-Expressing Lymphocyte from Type 1 Diabetes Patients Encodes a Potent T Cell Autoantigen
Ahmed R, Omidian Z, Giwa A, Cornwell B, Majety N, Bell DR, Lee S, Zhang H, Michels A, Desiderio S, Sadegh-Nasseri S, Rabb H, Gritsch S, Suva ML, Cahan P, Zhou R, Jie C, Donner T, Hamad ARA
Cell. 2019 May 30;177(6):1583-1599
PMID: 31150624
43
Cell Fate Engineering Tools for iPSC Disease Modeling.
Lo EKW, Cahan P.
Methods Mol Biol. 2019;1975:427-454.
PMID: 31062321
42
A single cell transcriptional portrait of embryoid body differentiation and comparison to progenitors of the developing embryo
Spangler, A, Su, E, Craft, AM, Cahan P
Stem Cell Research. 2018 Aug;31:201-215.
PMID: 30118958
41
A CLK3-HMGA2 Alternative Splicing Axis Impacts Human Hematopoietic Stem Cell Molecular Identity throughout Development
Cesana M*, Guo MH*, Cacchiarelli D*, Wahlster L, Barragan J, Doulatov S, Vo LT, Salvatori B, Trapnell C, Clement K, Cahan P, Tsanov KM, Sousa PM, Tazon-Vega B, Bolondi A, Giorgi FM, Califano A, Rinn JL, Meissner A, Hirschhorn JN, Daley GQ
Cell Stem Cell. 2018 Apr 5;22(4):575-588.e7
PMID: 29625070
40
Programming Morphogenesis through Systems and Synthetic Biology
Velazquez JJ*, Su E*, Cahan P^, Ebrahimkhani MR^
Trends in Biotechnology. 2017 Dec 08 pii: S0167-7799(17)30301-3
PMID: 29229492
39
Assessment of engineered cells using CellNet and RNA-seq
Radley AH, Schwab RM, Tan Y, Kim J, Lo EKW, Cahan P
Nature Protocols. 2017 Apr 27;12:1089-1102
PMID: 28448485
38
Understanding development and stem cells using single cell-based analyses of gene expression
Kumar P, Tan Y, Cahan P
Development. 2017 144: 17-32;
PMID: 28049689
37
Engineered Murine HSCs Reconstitute Multi-lineage Hematopoiesis and Adaptive Immunity.
Lu YF, Cahan P, Ross S, Sahalie J, Sousa PM, Hadland BK, Cai W, Serrao E, Engelman AN, Bernstein ID, Daley GQ.
Cell Rep. 2016 Dec 20;17(12):3178-3192. doi: 10.1016/j.celrep.2016.11.077.
PMID: 28009288
36
TGF-β inhibitors stimulate red blood cell production by enhancing self-renewal of BFU-E erythroid progenitors.
Gao X, Lee HY, da Rocha EL, Zhang C, Lu YF, Li D, Feng Y, Ezike J, Elmes RR, Barrasa MI, Cahan P, Li H, Daley GQ, Lodish HF.
Blood. 2016 Oct 24. pii: blood-2016-05-718320.
PMID: 27777239
35
Posttranscriptional manipulation of TERC reverses molecular hallmarks of telomere disease
Boyraz B, Moon DH, Segal M, Muosieyiri MZ, Aykanat A, Tai AK, Cahan P, Agarwal S.
Journal of Clinical Investigation. 2016 Aug 2; pii: 87547.
PMID: 27482890
34
Multiple mechanisms disrupt the let-7 microRNA family in neuroblastoma
Powers JT, Tsanov KM, Pearson DS, Roels F, Spina CS, Ebright R, Seligson M, de Soysa Y, Cahan P, Theißen J, Tu HC, Han A, Kurek KC, LaPier GS, Osborne JK, Ross SJ, Cesana M, Collins JJ, Berthold F, Daley GQ
Nature. 2016 July 6; doi:10.1038/nature18632.
PMID: 27383785
33
LIN28 Regulates Stem Cell Metabolism and Conversion to Primed Pluripotency
Zhang J, Ratanasirintrawoot S, Chandrasekaran S, Wu Z, Ficarro SB, Yu C, Ross CA, Cacchiarelli D, Xia Q, Seligson M, Shinoda G, Xie W, Cahan P, Wang L, Ng SC, Tintara S, Trapnell C, Onder T, Loh YH, Mikkelsen T, Sliz P, Teitell MA, Asara JM, Marto JA, Li H, Collins JJ, Daley GQ
Cell Stem Cell. 2016 Jun 15. pii: S1934-5909(16)30093-5.
PMID: 27320042
32
Computational Tools for Stem Cell Biology
Bian Q and Cahan P
Trends in Biotechnology. 2016 Jun 15;34(12):993–1009.
DOI: 10.1016/j.tibtech.2016.05.010
31
Enabling direct fate conversion with network biology
Cahan P
Nature Genetics. 2016 Feb 24;48(3):226-7.
PMID: 26906680
30
Transcriptional Landscape of Cardiomyocyte Maturation
Uosaki H, Cahan P, Lee DI, Wang S, Miyamoto M, Fernandez L, Kass DA, Kwon C
Cell Reports. 2015 Nov 24;13(8):1705-1716. Epub 2015 Nov 12.
PMID: 26586429
29
Poly(A)-specific ribonuclease (PARN) mediates 3′-end maturation of the telomerase RNA component
Moon DH, Segal M, Boyraz B, Guinan E, Hofmann I, Cahan P, Tai AK, Agarwal S
Nature Genetics. 2015 Oct 19.
PMID: 26482878
28

Published prior to joining Johns Hopkins

Defining cellular identity through network biology
Cahan P, Morris SA, Collins JJ, Daley GQ
Cell Cycle. 2014 Nov 1;13(21):3313-3314.
PMID: 25485572
27
Deconstructing transcriptional heterogeneity in pluripotent stem cells
Kumar RM*, Cahan P*, Shalek A, Satija R, DaleyKeyser A, Li H, ZhangJ, Pardee K, Gennert D, Trombetta JJ, FerranteTC, Regev A, Daley GQ, Collins JJ
Nature. 2014 Dec 4;516(7529):56-61.
PMID: 25471879
26
A non-transcriptional role for Oct4 in the regulation of mitotic entry
Zhao R*, Deiblerb RW*, Lerou PH, Ballabeni A, Heffner GC, Cahan P, Unternaehrer JJ, Kirschner MW, and Daley GQ
Proceedings of the National Academy of Sciences. 2014 Nov 4;111(44):15768-73.
PMID: 25324523
25
CellNet: Network Biology Applied to Stem Cell Engineering
Cahan P*, Li H*, Morris SA*, Lummertz da Rocha E, Daley GQ, Collins JJ
Cell. 2014 Aug 14;158(4):903-15.
PMID: 25126793
24
Dissecting Engineered Cell Types and Enhancing Cell Fate Conversion via CellNet
Morris SA*, Cahan P*, Li H*, Zhao AM, San Roman AK, Shivdasani RA, Collins JJ, Daley GQ
Cell. 2014 Aug 14;158(4):889-902.
PMID: 25126792
23
Hippo pathway activity influences liver cell fate
Yimlamai D, Christodoulou C, Galli GG, Yanger K, Pepe-Mooney B, Gurung B, Shrestha K, Cahan P, Stanger BZ, Camargo FD
Cell. 2014 Jun 5;157(6):1324-38.
PMID: 24906150
22
Origins and implications of pluripotent stem cell variability and heterogeneity
Cahan P, Daley GQ
Nature Reviews Molecular Cell Biology. 2013 Jun;14:357-68.
PMID: 23673969
21
The transcriptional landscape of hematopoietic stem cell ontogeny
McKinney-Freeman S*, Cahan P*, Li H*, Lacadie SA, Huang HT, Curran M, Loewer S, Naveiras O, Kathrein KL, Konantz M, Langdon EM, Lengerke C, Zon LI, Collins JJ, Daley GQ
Cell Stem Cell. 2012 Nov 2;11(5):701-14.
PMID: 23122293
20
Chromatin-modifying enzymes as modulators of reprogramming
Onder TT, Kara N, Cherry A, Sinha AU, Zhu N, Bernt KM, Cahan P, Marcarci BO, Unternaehrer J, Gupta PB, Lander ES, Armstrong SA, Daley GQ
Nature. 2012 Mar 4;483(7391):598-602.
PMID: 22388813
19
Polycomb repressive complex 2 regulates normal development of the mouse heart
He A, Ma Q, Cao J, von Gise A, Zhou P, Xie H, Zhang B, Hsing M, Christodoulou DC, Cahan P, Daley GQ, Kong SW, Orkin SH, Seidman CE, Seidman JG, Pu WT
Circulation Research. 2012 Feb 3;110(3):406-15.
PMID: 22158708
18
Investigating monogenic and complex diseases with pluripotent stem cells
Zhu H, Lensch MW, Cahan P, Daley GQ
Nature Reviews Genetics. 2011 Apr;12(4):266-75.
PMID: 21386866
17
Donor cell type can influence the epigenome and differentiation potential of human induced pluripotent stem cells
Kim K, Zhao R, Doi A, Ng K, Unternaehrer J, Cahan P, Huo H, Loh YH, Aryee MJ, Lensch MW, Li H, Collins JJ, Feinberg AP, Daley GQ
Nature Biotechnology. 2011 Nov 27;29(12):1117-9.
PMID: 22119740
16
Sequencing a mouse acute promyelocytic leukemia genome reveals genetic events relevant for disease progression
Wartman LD, Larson DE, Xiang Z, Ding L, Chen K, Lin L, Cahan P, Klco JM, Welch JS, Li C, Payton JE, Uy GL, Varghese N, Ries RE, Hoock M, Koboldt DC, McLellan MD, Schmidt H, Fulton RS, Abbott RM, Cook L, McGrath SD, Fan X, Dukes AF, Vickery T, Kalicki J, Lamprecht TL, Graubert TA, Tomasson MH, Mardis ER, Wilson RK, Ley TJ.
Journal of Clinical Investigation. 2011 Apr;121(4):1445-55.
PMID: 21436584
15
Structural variation of the mouse natural killer gene complex
Higuchi DA, Cahan P, Gao J, Ferris ST, Poursine-Laurent J, Graubert TA, Yokoyama WM.
Genes and Immunity. 2010 Dec;11(8):637-48.
PMID:20861859
14
Integrated genomics of susceptibility to alkylator-induced leukemia in mice
Cahan P, Graubert TA
BMC Genomics. 2010 Nov 17;11:638.
PMID: 21080971
13
Epigenetic memory in induced pluripotent stem cells
Kim K, Doi A, Wen B, Ng K, Zhao R, Cahan P, Kim J, Aryee MJ, Ji H, Ehrlich LI, Yabuuchi A, Takeuchi A, Cunniff KC, Hongguang H, McKinney-Freeman S, Naveiras O, Yoon TJ, Irizarry RA, Jung N, Seita J, Hanna J, Murakami P, Jaenisch R, Weissleder R, Orkin SH, Weissman IL, Feinberg AP, Daley GQ.
Nature. 2010 Sep 16;467(7313):285-90.
PMID: 20644535
12
POU4F1 is associated with t(8;21) acute myeloid leukemia and contributes directly to its unique transcriptional signature
Fortier JM, Payton JE, Cahan P, Ley TJ, Walter MJ, Graubert TA.
Leukemia. 2010 May;24(5):950-7.
PMID: 20376082
11
The impact of copy number variation on local gene expression in mouse hematopoietic stem and progenitor cells
Cahan P, Li Y, Izumi M, Graubert TA
Nature Genetics. 2009 Apr;41(4):430-7.
PMID: 19270704
10
wuHMM: a robust algorithm to detect DNA copy number variation using long oligonucleotide microarray data
Cahan P, Godfrey LE, Eis PS, Richmond TA, Selzer RR, Brent M, McLeod HL, Ley TJ, Graubert TA.
Nucleic Acids Research. 2008 Apr;36(7):e41.
PMID: 18334530
9
Meta-analysis of microarray results: challenges, opportunities, and recommendations for standardization
Cahan P, Rovegno F, Mooney D, Newman JC, St Laurent G 3rd, McCaffrey TA
Gene. 2007 Oct 15;401(1-2):12-8.
PMID: 17651921
8
A high-resolution map of segmental DNA copy number variation in the mouse genome
Graubert TA, Cahan P*, Edwin D*, Selzer RR, Richmond TA, Eis PS, Shannon WD, Li X, McLeod HL, Cheverud JM, Ley TJ
PLoS Genetics. 2007 Jan 5;3(1):e3.
PMID: 17206864
7
Involvement of HTLV-I Tax and CREB in aneuploidy: a bioinformatics approach
de la Fuente C, Gupta MV, Klase Z, Strouss K, Cahan P, McCaffery T, Galante A, Soteropoulos P, Pumfery A, Fujii M, Kashanchi F
Retrovirology. 2006 Jul 5;3:43.
PMID: 16822311
6
Systems pharmacogenomics in yeast
Cahan P, Marsh S, McLeod HL
Pharmacogenomics.2006 Mar;7(2):255-9.
PMID: 16515406
5
List of lists-annotated (LOLA): a database for annotation and comparison of published microarray gene lists
Cahan P, Ahmad AM, Burke H, Fu S, Lai Y, Florea L, Dharker N, Kobrinski T, Kale P, McCaffrey TA
Gene. 2005 Oct 24;360(1):78-82.
PMID: 16140476
4
Genomic profiling of acquired resistance to apoptosis in cells derived from human atherosclerotic lesions: potential role of STATs, cyclinD1, BAD, and Bcl-XL
Gagarin D, Yang Z, Butler J, Wimmer M, Du B, Cahan P, McCaffrey TA
Journal of Molecular and Cellular Cardiology. 2005 Sep;39(3):453-65.
PMID: 16005468
3
Identification and distribution of sequences having similarity to mitochondrial plasmids in mitochondrial genomes of filamentous fungi
Cahan P, Kennell JC
Molecular Genetics and Genomics. 2005 Jul;273(6):462-73.
PMID:15891911
2
Ranking Retrieval Systems without Relevance Judgments
Soboroff I, Nicholas C and Cahan P
Proceedings of the 24th Annual International Conference on Research and Development in Information Retrieval. (2001)
1