Johns Hopkins University
Johns Hopkins University
Master's student, BME
Discovery of novel interzone genes
Undergraduate, Public Health Studies and Molecular and Cellular Biology
Development and disorders of the synovial joint
PhD student, BME; co-advised with Andy Feinberg
Thesis: The landscape of epigenetic and transcriptional memory in pancreatic cancer initiation and progression
Senior scientist, bioinformatics, Regeneron
Research technologist
Engineering mesoderm derivatives from human pluripotent stem cells
Master's student, BME
Multi-omics integration to infer precise gene regulatory networks
Research specialist, Stanford University
Undergraduate, BME
Integrative exploration of metabolomic and transcriptomic states in osteosarcoma
Bioinformatics support scientist, Illumina
PhD student, BME; co-advised with Alexis Battle
Thesis: Assessing reliability of causal models of transcription
Research scientist, Alden Scientific
PhD student, BME
Thesis: Realistic computational models of transcriptional state transitions in development and cancer
Senior scientist I, systems immunology, AbbVie
Research specialist
Aging and reprogramming of bone marrow stromal cells
PhD student, Washington University in St. Louis
Master's student
ReadyCellOne, a Python tool to predict the functional capacity of engineered cells
PhD student, BCMB
Thesis: Gene regulatory networks governing multipotency of adult murine bone marrow stromal cells
Postdoctoral fellow, David Scadden's lab, Massachusetts General Hospital and Harvard University
Master's student
Wnt signaling and epigenomic remodeling in development
Senior scientist, Thermo Fisher Scientific
Undergraduate
Human embryonic progenitors
PhD student, Rice University
PhD student, BME
Thesis: Computational analysis of single-cell transcriptomic data for the identification and characterization of cell identity and fate potential
Postdoctoral fellow, Elana Fertig's lab, Johns Hopkins University
PhD student, BME
Thesis: Computational tools to explore cell identity transitions with application to cell fate engineering
Postdoctoral fellow, Jason Buenrostro's lab, Harvard University and the Broad Institute
Master's student, BME
Thesis: Detection of non-transcriptionally mediated changes in transcription factor activity using multiomic single-cell data
Bioinformatics research associate, SeqMatic
Postdoctoral fellow, then instructor
Synovial joint development and osteoarthritis
Scientist II, Georgiamune
Undergraduate, BME
Single-cell algorithms to reconstruct gene regulatory networks
PhD student, Yale University
Undergraduate, BME
Creation and optimization of cell fate engineering tools
MD/PhD student, Johns Hopkins School of Medicine
PhD student, BCMB
SingleCellNet; single-cell comparison of in vitro and in vivo development
Postdoctoral fellow, Garry Nolan's lab, Stanford University
Research specialist
Directed differentiation of embryonic stem cells to articular chondrocytes
Research associate, Lieber Institute
PREP scholar
Mouse models of osteoarthritis
PhD student, XDBio program, Johns Hopkins University
Visiting summer researcher, Taipei Medical University
Validation, improvement and extension of CancerCellNet
Returned to medical school
Summer FARM fellow
SingleCellNet for engineered neural cell populations
Returned to the University of Kansas
Undergraduate, Cell Biology
Maximizing mesoderm formation during directed differentiation of embryoid bodies
Research assistant, Kolb lab, Johns Hopkins School of Medicine
High school summer student
Stem cell differentiation
High school summer student
Pancreatic organoids
Undergraduate, BME
Imputation and cancer transcriptional networks
Analyst, BlackRock
Bioinformatics assistant
Cloud-based framework for deploying reusable bioinformatics tools
Bioinformatics engineer, PGDx
Medical student, Johns Hopkins
Gene regulatory networks in cancer biology
Returned to medical school
Visiting summer researcher
Articular chondrocyte differentiation and genome engineering
Northeastern University
Master's student, BME
Single-cell RNA-seq; in silico assessment of cancer cell line fidelity
Clinical programmer, Genentech
Visiting master's student from University College London
Adapting CellNet for RNA-seq
PhD student, University of Cambridge and Microsoft Research
Undergraduate, BME
Gene regulatory network inference
Durr lab, Johns Hopkins University
Undergraduate, Computer Science
Data curation for the RNA-seq adaptation of CellNet
Visiting summer researcher, University of Chicago
CancerCellNet
Returned to the University of Chicago